Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015877919.1_cds_XP_016436604.1_32446
CDS Infomation

[gene=LOC107762733] [db_xref=GeneID:107762733] [protein=probable protein phosphatase 2C 33] [protein_id=XP_016436604.1] [location=join(70745..70762,74095..74460,74982..75371,75464..75581,78918..79141,79281..79763)] [gbkey=CDS]
Sequence

ATGGTCAAAGTCTCAAAGGATTGTTTGTTATTTATTAGAAGGGGAGGTGTGACGGATCCG
AACACGGAAAATAGGGGGGTTGGTTGTGTAGCTGCTCTGGATTGTTTATTGAATATAGTC
CGGGCTCTCCGGACGGGGTCCTGCTTAACTTATGAAAGCAGGACCCCTGTTCCGGGTTCT
CCTACATCCGCAGTTGGAATTAGGAAAAAAAAGAGCTCAAAGAAGAGGCCAGTTTCTAGG
AATTCTTCTTTTAACAGTCGTAAGGAAGAACAGTTGCGTAAGATTCCTGGCCGCTTATTC
TTGAATGGCTCGAGTGATGTGGCTTCGCTCTTCACTCAGCAAGGCAAGAAAGGAACTAAT
CAAGATGCCATGATTGTTTGGGAGAACTTTGGTTCCAGAACAGATACAGTATTCTGTGGT
GTTTTTGATGGCCACGGTCCTCATGGCCATATGGTTGCAAAGCGAGTCCGAGATTCCCTT
CCCTTAAAGCTAAGTGCACACTGGGAAGTTAATGTGAAAAGTGAGGATGTTCTGAAGGAG
ATCAGTCTAAATGCTGGGGCTAGCCTAAATTCTGAGGATGCTTCCCTTATATCTGCTGAT
GAGGAGTCGAGGGTCTCAATTGACGTTGAAGAGGCTGAAAAGCAACCAGAGGTCTTTCAG
ACTTTGAAGGAGTCATTTCTGAAGGCTTATAAAGTTATGGATAGGGAACTGAGAAGCTAC
ACCAATATTGACTGCTTCTGTAGTGGGACAACAGCTGTAACCTTTGTTAAACAGGGTCAG
GATCTTGTTATTGGAAATGTAGGCGACTCCCGAGCAGTTCTGGGTACAAGAGATAAAAGT
GGTTCTCTTACTGCTGTACAATTGACAGTGGATCTGAAGCCTAATCTACCAGCGGAGGCT
GAGAGAATTCGTAAATGTAGAGGACGTGTTTTTGCTCTTCGCGATGAACCGGAGGTTTCA
AGAGTGTGGTTGCCACATAGTGACTCTCCTGGACTTGCAATGGCACGTGCTTTTGGGGAT
TTTTGCCTCAAGGATTTTGGTCTCATCTCTGTGCCTGAAATATCATATAGGCGTTTAACG
GGAAAAGATGAGTTCATTGTTCTGGCAACTGATGGGATATGGGATGTACTTTCAAATGAT
GAAGTTGTAAAGATCATAGCATCCGCTTCATCCCGTTCATCTGCAGCTCGATCACTAGTT
GAAGCAGCTGTTCGAGCCTGGAGGACAAAATACCCAACTTCTAAAGTTGATGATTGTGCA
GTTGTCTGCCTTTTTCTTGATTCAAACTCAAATAACTTGTCTACTGCTTCTAATACAAAC
TACAATGATGAGACTGTCTCAATGGAAGCAAATGAAGTTGATGTCAAGACAGATGATGCC
TCTGGTCCAGCTGCATTGCCTCGTTCTGGAACTGTTCGAGAAGGCGATGAGGTTTCAGGA
GAAGGCGACGACGTATCAGAGGAAGGCATAGAGGAAACCTCAGAACATGAGGAACTGCTC
GCGGAGGTTGGGACAGAATGGTCCGCGCTTGAAGGGGTTTCCCGGCTGAATACATTGTTG
ACATTGCCAAAGTTTGTGCCTGATAAAGAAGAGAAGTAA

Peptide Sequence

PEP ID

XP_016436604.1
PEP Infomation

PREDICTED: probable protein phosphatase 2C 33 [Nicotiana tabacum]
Sequence

MVKVSKDCLLFIRRGGVTDPNTENRGVGCVAALDCLLNIVRALRTGSCLTYESRTPVPGS
PTSAVGIRKKKSSKKRPVSRNSSFNSRKEEQLRKIPGRLFLNGSSDVASLFTQQGKKGTN
QDAMIVWENFGSRTDTVFCGVFDGHGPHGHMVAKRVRDSLPLKLSAHWEVNVKSEDVLKE
ISLNAGASLNSEDASLISADEESRVSIDVEEAEKQPEVFQTLKESFLKAYKVMDRELRSY
TNIDCFCSGTTAVTFVKQGQDLVIGNVGDSRAVLGTRDKSGSLTAVQLTVDLKPNLPAEA
ERIRKCRGRVFALRDEPEVSRVWLPHSDSPGLAMARAFGDFCLKDFGLISVPEISYRRLT
GKDEFIVLATDGIWDVLSNDEVVKIIASASSRSSAARSLVEAAVRAWRTKYPTSKVDDCA
VVCLFLDSNSNNLSTASNTNYNDETVSMEANEVDVKTDDASGPAALPRSGTVREGDEVSG
EGDDVSEEGIEETSEHEELLAEVGTEWSALEGVSRLNTLLTLPKFVPDKEEK

Transcript Sequence

Gene sequence data has not been registered.